Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015898422.1_cds_XP_016448520.1_43163
CDS Infomation

[gene=LOC107773630] [db_xref=GeneID:107773630] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X2] [protein_id=XP_016448520.1] [location=complement(join(14414..15357,15436..15675,15936..16016,16096..16822))] [gbkey=CDS]
Sequence

ATGGCTTTGGCTGCTTCTTTTATTTGCTTCCTTTTATCTTTTCTTCTGATCTTAGTTCAG
GCAAATGGCAGAAACGATTCTAGTTGTCCAAAGTCCTTTTCTTGTGGGAATCTTACTGAT
CTGAGCTTTCCTTTCTCTCTTTCCACACAACCTGATTGTGGAATAATCCCTCTATCTGGT
TGTGATGCTAAACCTCATCCCAGAATCCAACTGCTTCCTGGAGGAGATTGGTACTATGCT
TTAGAGAAGCAATATTCATCAATTTGGCTTGGGGACGCGAAGTTTCAAACGACATTGAAT
CAACACAAGTGCCAGGCTTTTAACAAAGATTTCTTCCTTCCAATCTCTCCTTCTGTTTCT
TTCCCTATACTTAATCTTTACAACTTCTTCAAATGCAACAGCACCACTAATAATACCCCG
AGCATTACCCAGAAGAAGAACGATCATTTTGCTGGTTATAAAATGTACAATGGCTGTAAA
GGCTTCAGCATATACTACAAGCTTCCCGGAGATGATGATGTTAAAGACATTCCAGCAGAC
AATCTTCCTACCAACTGTTCACTTATCAGATTGCCATTTCACTCTGTATCCGGAGATGGT
GATTTGTTTGACTTGTTAGGTCCCGAAATTCATGTAGAATGGAAACTCTCTGAGGACTGT
AGCCGATGCCACTATGGTGGAGGTCAATGCCAGACTGATAAAACCAACAGATTTTATTGT
CACGAAGATACAAACACAACTAGGGGTAGTACTGATCAAAGAAAAGAATCAACTCGAAGA
AATACAGTGGAGCTGATTCTGGGTACAGGATCGGTGATGATAACTTGTGCAGTTGTATAC
TTTATCTGGCGTTACAAGAAGAGTAAATTTAGTCCATCCCACTTCCTCTCGACAAAGAAA
CTATCAGATATTTTTAATCACGATGTTGAGGGAGGCAGTATATTCTTCGGTGTCCCAGTC
TTCCCCTATTCAGAACTTGAAGAGGCCACAAATGATTTCAATTCCTCGAGAGTACTTGGA
GATGGAGGTTATGGAACTGTTTACTATGGAAAACTTAAGGATGGTCGAGAGGTTGCTGTG
AAGCGCCTCTACGAGCACAACTGCAAGCGAATGGAGCAGTTTGTAAATGAAATTGAGATC
CTTACTAGACTAAGGCACAACAATCTTGTCACCCTCTATGGCTGCACTTCAAGGCGAAGC
CGTGAACTACTCCTTGTCTATGAATACATTCCTAATGGAACTCTTGCTGATCACCTCCAT
GGTGACAGAGCGAAGGACGGATTACTCACGTGGCCAATCCGCATGAACATCGCCATAGAA
ACTGCTGGTGCATTGGCTTACCTGCATGCTTCTGACATAATACACTGTGATGTCAAGACT
AATAACATACTCCTTGATCACAACTTTAGTGTTAAAGTTGCAGATTTTGGGATTTCAAGG
CTCTTCCCAAATGATGTCTCTCATATTTCAACTGCACCGCGGGGGACCCCTGGCTATATT
GATCCAAAGTATCACGAATGTTACCAGCTGACTAGTAAAAGCGATGTTTATAGCTTCGGG
GTGGTTCTTGTTGAACTCATTTCATCCATGCCAGCTGTGGATATGAGTAGGCATAGCCAA
GAGATTAATTTGGCTAACTTCGCAATAAACAAGATTATAAAATCTGCATTTAACGAGCTG
ATCGATCCATCTCTGGGGTTCGATTCAGATACCAAGATTTGGGAAATGGCAACTTCAGTG
GCAGAACTGGCTTTTCTATGCTTGCAGACAGATAGGGATGTGAGGCCTAGTATGGTTGAA
GTTTTGGATATTCTAAAGGAGATTCAGACTAGTGAATTTGACAATGAGAAGAGAGCTAAA
GTAGCAACAGCTCCTCCTTTCCCTGAATCAGAAAATTTGTTATTGTTGAAGCAAGTCAAA
TCACTACCTTCACCAAATTCTTTGACTGATAATTGGTTTACTTGCTCTGATATAACTAGT
ACAACTAGTTAA

Peptide Sequence

PEP ID

XP_016448520.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 isoform X2 [Nicotiana tabacum]
Sequence

MALAASFICFLLSFLLILVQANGRNDSSCPKSFSCGNLTDLSFPFSLSTQPDCGIIPLSG
CDAKPHPRIQLLPGGDWYYALEKQYSSIWLGDAKFQTTLNQHKCQAFNKDFFLPISPSVS
FPILNLYNFFKCNSTTNNTPSITQKKNDHFAGYKMYNGCKGFSIYYKLPGDDDVKDIPAD
NLPTNCSLIRLPFHSVSGDGDLFDLLGPEIHVEWKLSEDCSRCHYGGGQCQTDKTNRFYC
HEDTNTTRGSTDQRKESTRRNTVELILGTGSVMITCAVVYFIWRYKKSKFSPSHFLSTKK
LSDIFNHDVEGGSIFFGVPVFPYSELEEATNDFNSSRVLGDGGYGTVYYGKLKDGREVAV
KRLYEHNCKRMEQFVNEIEILTRLRHNNLVTLYGCTSRRSRELLLVYEYIPNGTLADHLH
GDRAKDGLLTWPIRMNIAIETAGALAYLHASDIIHCDVKTNNILLDHNFSVKVADFGISR
LFPNDVSHISTAPRGTPGYIDPKYHECYQLTSKSDVYSFGVVLVELISSMPAVDMSRHSQ
EINLANFAINKIIKSAFNELIDPSLGFDSDTKIWEMATSVAELAFLCLQTDRDVRPSMVE
VLDILKEIQTSEFDNEKRAKVATAPPFPESENLLLLKQVKSLPSPNSLTDNWFTCSDITS
TTS

Transcript Sequence

Gene sequence data has not been registered.